The program use the following parameters to define the blocks: The method is: 3 - Discrete Dynamic Programming up to 40 tag SNPs; The data type is: 5 - All possible blocks (method unspecified); The input data file is: TestBT.dat ; The output file for the block is: TestBlockRes-005.dat ; Results Part -- For discrete dynamic programming algorithm: 71 numBlock numTagSNP coverNumSNP coverRatio numDelete retainGenome delGenome 87 0 122 0.50779 55 254.552 246.740 87 1 125 0.53349 54 267.432 233.860 87 2 128 0.55409 53 277.762 223.530 87 3 129 0.57264 53 287.062 214.230 88 4 134 0.58912 53 295.322 205.970 88 5 135 0.60490 53 303.232 198.060 89 6 138 0.62020 53 310.902 190.390 90 7 140 0.63438 53 318.012 183.280 89 8 145 0.64825 53 324.962 176.330 90 9 147 0.66243 53 332.072 169.220 89 10 148 0.67592 53 338.832 162.460 88 11 150 0.68922 52 345.502 155.790 89 12 153 0.70211 52 351.962 149.330 90 13 155 0.71402 51 357.932 143.360 89 14 156 0.72519 50 363.532 137.760 90 15 160 0.73632 51 369.112 132.180 91 16 159 0.74693 48 374.432 126.860 92 17 163 0.75807 49 380.012 121.280 90 18 165 0.76858 49 385.282 116.010 92 19 167 0.77753 48 389.772 111.520 92 20 169 0.78627 47 394.152 107.140 92 21 171 0.79493 46 398.492 102.800 90 22 172 0.80321 45 402.642 98.650 90 23 173 0.81079 44 406.442 94.850 90 24 174 0.81817 44 410.142 91.150 90 25 175 0.82545 44 413.792 87.500 91 26 177 0.83259 44 417.372 83.920 90 27 178 0.83953 43 420.852 80.440 89 28 179 0.84648 42 424.332 76.960 88 29 181 0.85310 42 427.652 73.640 88 30 184 0.85950 41 430.862 70.430 88 31 186 0.86591 39 434.072 67.220 89 32 188 0.87227 38 437.262 64.030 90 33 190 0.87829 37 440.282 61.010 88 34 192 0.88390 37 443.092 58.200 88 35 193 0.88925 36 445.772 55.520 88 36 194 0.89455 35 448.432 52.860 87 37 195 0.89978 34 451.052 50.240 86 38 197 0.90459 33 453.462 47.830 86 39 198 0.90933 32 455.842 45.450 86 40 199 0.91400 31 458.182 43.110 86 41 200 0.91857 30 460.472 40.820 87 42 202 0.92306 28 462.722 38.570 85 43 204 0.92751 26 464.952 36.340 85 44 205 0.93184 26 467.122 34.170 85 45 207 0.93603 25 469.222 32.070 83 46 209 0.94019 24 471.312 29.980 82 47 210 0.94436 23 473.402 27.890 82 48 211 0.94754 22 474.992 26.300 81 49 212 0.95023 21 476.342 24.950 81 50 213 0.95282 21 477.642 23.650 77 51 215 0.95643 18 479.452 21.840 76 52 216 0.95913 17 480.802 20.490 76 53 217 0.96172 17 482.102 19.190 75 54 218 0.96429 16 483.392 17.900 75 55 219 0.96683 15 484.662 16.630 74 56 220 0.96934 14 485.922 15.370 72 57 221 0.97177 13 487.142 14.150 71 58 222 0.97419 12 488.352 12.940 70 59 223 0.97652 11 489.522 11.770 69 60 224 0.97883 10 490.682 10.610 69 61 225 0.98109 9 491.812 9.480 68 62 226 0.98332 8 492.932 8.360 68 63 227 0.98552 7 494.032 7.260 67 64 228 0.98769 6 495.122 6.170 67 65 229 0.98983 5 496.192 5.100 64 66 230 0.99190 4 497.232 4.060 64 67 231 0.99394 3 498.252 3.040 64 68 232 0.99597 2 499.272 2.020 63 69 233 0.99799 1 500.282 1.010 61 70 234 1.00000 0 501.292 0.000 Results Part -- The information of Final Block Partition: 86 BlockID NumTagSNP StartPos EndPos BlockSize Block_0001 0 0 0 1 Block_0002 0 1 1 1 Block_0003 0 2 2 1 Block_0004 0 4 5 2 Block_0005 0 6 6 1 Block_0006 1 7 10 4 Block_0007 2 12 17 6 Block_0008 0 18 18 1 Block_0009 0 19 19 1 Block_0010 1 20 22 3 Block_0011 0 24 24 1 Block_0012 2 25 30 6 Block_0013 0 32 33 2 Block_0014 3 34 40 7 Block_0015 0 42 43 2 Block_0016 0 44 45 2 Block_0017 0 47 49 3 Block_0018 2 50 54 5 Block_0019 0 55 55 1 Block_0020 0 57 59 3 Block_0021 0 61 62 2 Block_0022 0 64 65 2 Block_0023 1 66 67 2 Block_0024 0 68 69 2 Block_0025 0 70 70 1 Block_0026 0 73 73 1 Block_0027 0 75 75 1 Block_0028 0 77 77 1 Block_0029 0 78 80 3 Block_0030 3 81 88 8 Block_0031 0 89 90 2 Block_0032 0 91 93 3 Block_0033 2 95 101 7 Block_0034 0 102 104 3 Block_0035 0 105 105 1 Block_0036 1 107 109 3 Block_0037 0 110 110 1 Block_0038 0 111 111 1 Block_0039 0 115 115 1 Block_0040 0 117 117 1 Block_0041 1 118 119 2 Block_0042 3 121 126 6 Block_0043 0 127 129 3 Block_0044 0 130 131 2 Block_0045 0 134 136 3 Block_0046 1 137 139 3 Block_0047 0 140 141 2 Block_0048 0 143 143 1 Block_0049 0 145 145 1 Block_0050 0 147 147 1 Block_0051 0 149 149 1 Block_0052 0 150 150 1 Block_0053 0 152 152 1 Block_0054 0 154 154 1 Block_0055 0 156 156 1 Block_0056 0 157 158 2 Block_0057 2 159 162 4 Block_0058 0 163 163 1 Block_0059 0 164 165 2 Block_0060 0 166 166 1 Block_0061 0 167 168 2 Block_0062 0 170 170 1 Block_0063 0 171 172 2 Block_0064 2 173 177 5 Block_0065 1 178 179 2 Block_0066 1 180 183 4 Block_0067 1 185 186 2 Block_0068 2 187 192 6 Block_0069 0 193 194 2 Block_0070 0 196 196 1 Block_0071 0 197 197 1 Block_0072 0 198 198 1 Block_0073 2 200 207 8 Block_0074 0 208 208 1 Block_0075 1 209 210 2 Block_0076 0 211 211 1 Block_0077 0 213 213 1 Block_0078 1 214 215 2 Block_0079 1 217 218 2 Block_0080 0 219 220 2 Block_0081 0 221 222 2 Block_0082 0 223 223 1 Block_0083 0 224 224 1 Block_0084 1 225 227 3 Block_0085 1 228 230 3 Block_0086 1 231 233 3 The total number of blocks is: 86 The total number of tag SNPs is: 40 The number of SNPs in the largest block is: 8 The total length of covered genome is: 458.182275 (0.914002)