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T Mark Beasley, Ph.D.

T Mark Beasley, Ph.D. Department of Biostatistics
Ryals Public Health Bldg, 317
University of Alabama at Birmingham
Birmingham, AL 35294
Phone: (205) 975-4957
Fax: (205) 975-2540
E-mail: mbeasley@uab.edu
Full CV


Education

Ph.D., 1993, Southern Illinois University
M.A., 1988, Middle Tennessee State University
B.A., 1985, Middle Tennessee State University

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Professional Organizations and Groups

Publications

Click here for listing of recent publications

  • 2009
  • 2008
  • 2007
  • 2006
  • 2005
  • 2004
  • pre 2004
  1. Limdi NA, Wiener H, Goldstein JA, Acton RT, Beasley TM. (2009). Influence of CYP2C9 and VKORC1 on warfarin response during initiation of therapy. Blood Cells Mol Dis. [Epub ahead of print] [PMID: 19297219]
     
  2. Limdi NA, Beasley TM, Baird MF, Goldstein JA, McGwin G, Arnett DK, Acton RT, Allon M. (2009). Kidney function influences warfarin responsiveness and hemorrhagic complications. J Am Soc Nephrol. 20:912-21 [PMID: 19225037]
     
  3. Beasley, T. M., Erickson, S., & Allison, D. B. (in press). Rank-Based Inverse Normal Transformations are Increasingly Used, But When Are They Merited? Behavior Genetics. [PMID: 19526352]
     
  4. Colman, R. J., Anderson, R. M., Johnson, S. C., Kastman, E. K., Kosmatka, K. J., Beasley, T. M., Allison, D. B., Cruzen, C. Simmons, H. A., Kemnitz, J. W., Weindruch, R. (in press). Caloric restriction delays disease onset and mortality in rhesus monkeys. Science. 325(5937), 201-204 [PMID: 19590001]  
  1. Beasley, T. M. (2008). Seemingly Unrelated Regression (SUR) Models as a Solution to Path Analytic Models with Correlated Errors. Multiple Linear Regression Viewpoints, 34(1), 1-7.
     
  2. Headrick, T. C., Aman, S. Y., & Beasley, T. M. (2008). Simulating controlled variate and rank correlations based on the power method transformation. Communications in Statistics: Simulation and Computation, 37(3), 602-616. [DOI: 10.1080/03610910701812394]
     
  3. Colman, R. J., Beasley, T. M., Allison, D. B., & Weindruch, R. Attenuation of Sarcopenia by Dietary Restriction in Rhesus Monkeys. Journal of Gerontology: Biological Sciences, 63A(6), 556-559. [PMID: 18559628]
     
  4. Limdi N. A., Beasley T. M., Crowley, M. R., Goldstein, J. A., Rieder, M.J., Flockhart, D.A., Arnett, D.K., Acton, R.T., & Liu, N. (2008). VKORC1 polymorphisms, haplotypes and haplotype groups on warfarin dose among African-Americans and European-Americans. Pharmacogenomics, 9(10), 1445-1458. [PMID: 18855533]
     
  5. Dure, L.S., Quaid, K., & Beasley, T. M. (2008). A Pilot Assessment of Parental Practices and Attitudes Regarding Risk Disclosure and Clinical Research Involving Children in HD Families. Genetics in Medicine, 10(11), 811-819. [PMID: 18941422]
     
  6. Fowler, C. G., Chiasson K. B., Hart, D. B., Beasley, T. M., Kemnitz, J., & Weindruch, R. (2008). Tympanometry in Rhesus Monkeys: Effects of Aging and Caloric Restriction. International Journal of Audiology, 47(4), 209-214. [PMID: 18389417]
     
  7. Limdi N. A., Arnett, D. K., Goldstein, J. A., Beasley, T. M., McGwin, G., Adler, B. K., & Acton, R. T. (2008). Influence of CYP2C9 and VKORC1 1173C/T on warfarin dose, anticoagulation attainment and maintenance among European-Americans African-Americans. Pharmacogenomics, 9(5), 511-526. [PMID: 18466099]
     
  8. Kohler, C. L., Schoenberger, Y-M. M., Beasley, T. M., & Phillips, M. (2008). Effectiveness Evaluation of the NOT Smoking Cessation Program for Adolescents. American Journal of Health Behavior, 32(4), 368-379. [PMID: 18092897]
     
  9. Limdi N. A., McGwin, G., Goldstein, J. A., Beasley, T. M., Arnett, D. K., Adler, B. K., Baird, M. F., & Acton, R. T. (2008). Influence of CYP2C9 and VKORC1 1173C/T Genotype on the Risk of Hemorrhagic Complications in African American and European American patients on warfarin. Clinical Pharmacology & Therapeutics, 83(2), 312-321. [PMID: 17653141]
     
  10. Viscovich, S., Eschenauer, R., Sinatra, R. S., & Beasley, T. M. (2008). Connecting Critical Thinking, Organizational Structures and Report Writing. Journal of School Connections, 1, 63-86.
     
  11. McKiernan, S.H., Colman, R. J., Lopez, M., Beasley, T. M., Weindruch, R., & Aiken, J. M. Longitudinal Analysis of Early Stage Sarcopenia in Aging Rhesus Monkeys. (2008). Experimental Gerontology. [PMID: 18983905]
     
  1. Oestenstad, R. K., Elliott. L. J., & Beasley, T. M. (2007). Effect of Gender and Respirator Brand on the Association of Respirator Fit with Facial Dimensions. Journal of Occupational & Environmental Hygiene, 4(12), 923-930. [PMID: 17957562]
     
  2. Limdi, N. A., Goldstein, J. A., Blaisdell, J. A., Beasley, T. M., Rivers, C. A., & Acton, R. T. (2007). Influence of CYP2C9 genotype on warfarin dose among African-Americans and European-Americans. Personalized Medicine, 4(2), 157-169. [DOI: 10.2217/17410541.4.2.157]
     
  3. Brand, J. P. L., Chen, L., Cui, X., Bartolucci, A. A., Page, G. P., Kim, K., Barnes, S., Srinivasasainagendra, V., Beasley, T. M., & Allison, D. B. (2007). An Adaptive Alpha-spending Algorithm Improves the Power of Statistical Inference in Microarray Data Analysis. Bioinformation, 1(10), 384-389. [PMID: 17597927]
     
  4. Raman, A., Ramsey, J. J., Kemnitz, J. W., Baum, S. T., Newton, W., Colman, R. J., Weindruch, R., Beasley, T. M., & Schoeller, D. A. (2007). Energy expenditure in the aging calorie restricted and control rhesus monkeys. American Journal of Physiology: Endocrinology and Metabolism, 292, E101-E106. [PMID: 16896169] [DOI:10.1152/ajpendo.00127.2006]
     
  1. Zhang, K., Wiener, H., Beasley, T. M., George, V., Amos, C. I., & Allison, D. B. (2006). An Empirical Bayes Method for Updating Inferences in Analysis of Quantitative Trait Loci Using Information from Related Genome Scans. Genetics, 173(4):2283-2296. [PMID: 16751667]
     
  2. Redden, D.T., Divers, J., Vaughan, L.K., Tiwari, H.K., Beasley, T.M., Fernandez, J.R., Kimberly, R.P., Feng, R., Padilla, M.A., Liu, N., Miller, M.B., & Allison, D.B. (2006). Regional Admixture Mapping and Structured Association Testing: Conceptual Unification and an Extensible General Linear Model. PLoS Genetics, . [PMID: 16934005]
     
  3. Limdi, N. A., Beasley, T. M., Allison, D. B., Rivers, C.A., & Acton, R.T. (2006). Racial differences in the prevalence of Factor V Leiden mutation among patients on chronic warfarin therapy. Blood Cells, Molecules, & Diseases, . [PMID: 16889993]
     
  4. Hughes, L. B., Beasley, T. M., Patel, H., Tiwari, H. K., Morgan, S. L., Baggott, J. E., Saag, K. G., McNicholl, J., Moreland, L. W., Alarcón, G. S., & Bridges, S. L. (2006). Racial or Ethnic Differences in Single Nucleotide Polymorphisms in the Methylenetetrahydrofolate Reductase Gene and Their Influence on Response to Methotrexate in Rheumatoid Arthritis. Annals of Rheumatic Disease, 65(9), 1213-1218. [PMID: 16439441]
     
  5. Alarcon, G. S., Bastian, H. M., Beasley, T. M., Roseman, J. M., Tan, F. K., Fessler, B. J., Vila, L. & M., McGwin, G. Jr.. (2006). Systemic lupus erythematosus in a multi-ethnic cohort (LUMINA): Contributions of admixture and socioeconomic status to renal involvement. Lupus, 15(1), 26-31. [PMID: 16482742]
     
  6. Kim, K., Page, G. P., Beasley, T. M., Barnes, S., Scheirer, K. E., & Allison, D. B. (2006). A proposed metric for assessing the measurement quality of individual microarrays. BMC Bioinformatics, 7:35. [PMID: 16430768]
     
  1. Beasley, T. M., Wiener, H., Morris, C. N., George, V., Bartolucci, A., Amos, C.I., & Allison, D. B. (2005). Empirical Bayes Method for Incorporating Data from Multiple Genome Scans. Human Heredity, 60, 36-42
     
  2. Beasley, T. M., Holt, J. K., & Allison, D. B. (2005). Comparison of Linear Weighting Schemes for Perfect Match and Mismatch Gene Expression Levels from Microarray Data. American Journal of PharmacoGenomics, 5(3), 197-205.
     
  3. Tiwari, H. K., Holt, J., George, V., Beasley, T. M., Amos, C. I., & Allison, D. B. (2005). A Class of Joint Covariance- and Marginal-Based Tests for Quantitative Trait Loci. Genetic Epidemiology, 28, 48-57.
     
  1. Beasley, T. M., Yang, D., Yi, N., Bullard, D. C., Amos, C. I., Xu, S., & Allison, D. B. (2004). Joint Tests for Quantitative Trait Loci in Experimental Crosses. Genetics, Selection & Evolution, 36, 601-619.
     
  2. Lei, X., Holt, J., & Beasley, T. M. (2004). Aligned Rank Tests as Robust Alternatives for Testing Interactions in Multiple Group Repeated Measures Designs with Heterogeneous Covariances. Journal of Modern Applied Statistical Methods, 3(2), 462-475.
     
  3. Hughes, L. B., Criswell, L. A., Beasley, T. M., Edberg, J. C., Kimberly, R. P., Moreland, L. W., Seldin, M.F., & Bridges, S. L. (2004). Genetic Risk Factors for Infection in Patients with Early Rheumatoid Arthritis taking Etanercept or Methotrexate. Genes and Immunity, 5(8), 641-647.
     
  4. Beasley, T. M., Page, G. P., Brand, J. P. L., Gadbury, G. L., Mountz, J. D., & Allison, D. B. (2004). Chebyshev's inequality for non-parametric testing with small N and a in microarray research. Journal of the Royal Statistical Society, Series C: Applied Statistics, 53, 95-108.
     
  5. Headrick, T. C., & Beasley, T. M. (2004). A method for simulating correlated nonnormal sets of linear statistical models. Communications in Statistics: Simulation and Computation., 33, 19-33.
     
  6. Shete, S., Beasley, T. M., Etzel, C., Fernández, J. R., Chen, J., Allison, D. B., & Amos, C. I. (2004). Effect of Winsorization on power and Type I error of variance components and related methods of QTL detection. Behavior Genetics, 34, 153-159.
     
  1. Beasley, T. M., & Zumbo, B D. (2003). Comparison of Aligned Friedman Rank and Parametric Methods for Testing Interactions in Split-Plot Designs. Computational Statistics and Data Analysis, 42(4), 569-593.
     
  2.  Etzel, C. J., Shete, S., Beasley, T. M., J.R. Fernández, J. R., Allison, D. B., & Amos, C. I. (2003). Effect of Box-Cox Transformation on Power of Haseman-Elston and Maximum-Likelihood Variance Components Tests to Detect Quantitative Trait Loci. Human Heredity, 55, 108-116.
     
  3. Fernández, J. R., Shriver, M. D., Beasley, T. M., Rafla-Demetrious, N., Parra, E. Albu, J., Nicklas, B., Ryan, A. S., Hoggart, C. L., McKeigue, P. M., Weinsier, R. L., & Allison, D. B. (2003). Relation of European admixture to obesity in African American women. Obesity Research, 11(7), 904-911.
     
  4. Gower, B. A., Fernández, J. R., Beasley, T. M., Shriver, M. D., & Goran, M. I. (2003). Using genetic admixture to explain racial differences in insulin-related phenotypes. Diabetes, 52, 1047-1051.
     
  5. Hubbert, K. A., Bussey, B. F., Allison, D. B., Beasley, T. M., & Heimburger, D. C. (2003). Does outcome-driven insurance reimbursement improve weight control? International Journal of Obesity, 27, 1423-1429.
     
  6. Beasley, T. M.   (2002). Multivariate aligned rank test for interactions in multiple group repeated measures designs. Multivariate Behavioral Research, 37, 197-226.
     
  7. Hergenrother, D.S., Olson, J. E., Beasley, T. M., & Smyth, C. M. (2002). Gender Bias: An Analysis of the Distribution of Institutional Aid. Journal of Student Financial Aid, 32(2), 46-57
     
  8. Fernández, J., Etzel, C., Beasley, T. M., Shete, S., Amos, C.I. & Allison, D. B. (2002). Improving the Power of Sib-Pair Quantitative Trait Loci (QTL) Detection by Phenotype Winsorization. Human Heredity, 53, 59-67.
     
  9. Allison, D. B., Fernández, J., Heo, M., Zhu, S., Etzel, C., Beasley, T. M., & Amos, C.I. (2002). Bias in Estimates of Quantitative-Trait Locus Effect in Genome Scans: Demonstration of the Phenomenon and a Method-of-Moments Procedure for Reducing Bias. American Journal of Human Genetics, 70, 575-585.
     
  10. Beasley, T. M.   (2002).  Influence of culture-related experiences and socio-demographic risk factors on cognitive readiness among preschoolers. Journal of Education for Students Placed At Risk, 7, 3-23.
     
  11. Beasley, T. M., Long, J. D., & Natali. M. (2001). A confirmatory factor analysis of the Mathematics Anxiety Scale for Children.  Measurement & Evaluation in Counseling & Development , 34, 14-26.
     
  12. Hergenrother, D. S., Olson, J. E., Smyth, C. M., & Beasley, T. M. (2001). Gender Bias in the Distribution of Institutional Student Aid: A Hierarchical Linear Modeling Approach. Multiple Linear Regression Viewpoints, 27(1), 38-45.
     
  13. Beasley, T. M. (2000). Nonparametric tests for analyzing interactions among intra-block ranks in multiple group repeated measures designs. Journal of Educational and Behavioral Statistics, 25, 20-59.
     
  14. Allison, D. B., Fernandez, J. R., Heo, M., & Beasley, T. M. (2000). Testing the Robustness of the New Haseman-Elston Quantitative-Trait Loci Mapping Procedure.  American Journal of Human Genetics, 67(1), 249-252. 
     
  15. Schumacker, R. E. & Beasley, T. M. (2000). The use of problem solving strategies in teaching mathematics. Multiple Linear Regression Viewpoints, 26(1), 20-27.
     
  16. Guastello, E. F., Beasley, T. M., & Sinatra, R. C. (2000). Concept mapping effects on science content comprehension of low-achieving inner-city seventh graders. Remedial & Special Education, 21, 356-356.
     
  17. Burke, K., Dunn, R., Beasley, T. M., Sinatra, R. C., Guastello, E. F.,  Griggs, S., Gemake, J., & Lewthwaite, B. (1999-2000). Relationship(s) between global-format and analytic format learning-style assessments based on the Dunn and Dunn model. National Forum of Applied Educational Research Journal, 13, 76-96.
     
  18. Beasley, T. M. (1998). I don’t like my data. Multiple Linear Regression Viewpoints, 25(1), 1-2.
     
  19. Beasley, T. M. (1998). Comments on the analysis of data with missing values. Multiple Linear Regression Viewpoints, 25(1), 40-44.
     
  20. Beasley, T. M. (1998). Think Different. Comments on alternative regression procedures. Multiple Linear Regression Viewpoints, 25(1), 83-90.
     
  21. Allison, D. B., & Beasley, T. M. (1998). Method and computer program for controlling the family-wise alpha rate in gene association studies involving multiple phenotypes. Genetic Epidemiology, 15, 87-101.
     
  22. Beasley, T. M., & Dolin, I. H. (1998). Factor analyses of the Chronic Self-Destructiveness Scale among delinquent and non-delinquent adolescent males.  Journal of Offender  Rehabilitation, 26(3/4), 141-156.
     
  23. Beasley, T. M., & Kittel, B. S. (1997). Psychosocial factors that influence health risk behaviors among tanning salon patrons.Evaluation in the Health Professions, 20, 377-388. 
     
  24. Signer, B., Beasley, T. M., & Bauer, E. (1997). Interaction of ethnicity, math achievement  level, socioeconomic status, and gender among high school students' math self-concepts. Journal of Education for Students Placed At Risk, 2, 377-393.
     
  25. Braio, A., Beasley, T. M., Dunn, R., Quinn, P., & Buchanan, K. (1997). Effects of incremental implementation of learning-styles strategies on urban low-achievers' structural analysis and attitude test scores. Journal of Educational Research, 91(1), 15-25.
     
  26. Beasley, T. M. (1996). Regression analyses for ABAB designs in educational research. Mid-Western Educational Researcher, 9(4), 18-23.
     
  27. Beasley, T. M., & Schumacker, R. E. (1995). Multiple regression approach to analyzing contingency tables: Post-hoc and planned comparison procedures. Journal of Experimental Education, 64, 79-93
     
  28. Beasley, T. M. (1995). Comparison of general linear model approaches to testing variance heterogeneity in true and quasi-experiments. Multiple Linear Regression Viewpoints, 22, 36-54.
     
  29. Beasley, T. M., & Leitner, D. W. (1995). The p-problem with forward selection stepwise regression: Algorithm for controlling Type I errors. Multiple Linear Regression Viewpoints, 22, 13-22.
     
  30. Dunn, R. S., Griggs, S. A., Gorman, B. S., Olson, J. E., & Beasley, T. M. (1995). A meta-analytic validation of the Dunn & Dunn model of learning-style preferences. Journal of Educational Research, 88, 353-362.
     
  31. Beasley, T. M. (1994). CORRMTX:  Generating correlated data matrices in SAS/IML. Applied Psychological Measurement: Computer Program Exchange, 18, 95.
     
  32. Dolin, I. H., Kelly, D. B., & Beasley, T. M. (1992). Chronic self-destructive behavior in normative and delinquent adolescents. Journal of Adolescence, 14, 57-63.
     
  33. Massad, P. M., Bobbitt, R. G., Kelly, M., & Beasley, T. M. (1988).  Effects of lesion laterality on the Satz-Mogel WAIS-R short form. Journal of Clinical Psychology, 44, 924-930.