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Tapan Mehta

Tapan Mehta Programmer Analyst
Department of Biostatistics
Ryals Public Health Bldg, 424
University of Alabama at Birmingham
Birmingham, AL 35294
Phone: (205) 975-9171
Fax: (205) 975-2540
E-mail: tmehta@ms.soph.uab.edu
Full CV


Tapan received his Masters in Electrical Engineering from the Department of Electrical and Computer Engineering with specialization in software engineering in December 2004. He worked as a Graduate Research Assistant with the Section on Statistical Genetics group in the Department of Biostatistics at UAB from 2002- 2004. As a research assistant he participated in writing specialized software for gene expression data, implementing statistical algorithms and technical writing.

Currently, he is working as a programmer analyst with the Section on Statistical Genetics. His work includes software engineering, high performance computing, implementing statistical algorithms, and data analysis of genetic, genomic and epidemiological data.

Publications
 

  • 2009
  • 2008
  • 2007
  • 2006
  • 2005
  • 2004
  1. Chen L, Page GP, Mehta T, Feng R, Cui X. Single nucleotide polymorphisms affect both cis- and trans-eQTLs. Genomics. 2009 Feb 25. [Epub ahead of print] [PMID: 19248827]
     
  2. Ioannidis JP, Allison DB, Ball CA, Coulibaly I, Cui X, Culhane AC, Falchi M, Furlanello C, Game L, Jurman G, Mangion J, Mehta T, Nitzberg M, Page GP, Petretto E, van Noort V. Repeatability of published microarray gene expression analyses. Nat Genet. 2009 Feb;41(2):149-55. Epub 2008 Jan 28. [PMID: 19174838]
     
  1. Srinivasasainagendra V, Page GP, Mehta T, Coulibaly I, Loraine AE. CressExpress: a tool for large-scale mining of expression data from Arabidopsis. Plant Physiol. 2008 Jul;147(3):1004-16. Epub 2008 May 8. [PMID: 18467456]
     
  1. Page GP, Zakharkin SO, Kim K, Mehta T, Chen L, Zhang K. Microarray analysis. Methods Mol Biol. 2007;404:409-30. Review. [PMID: 18450061]
     
  2. Falk CT, Finch SJ, Kim W, Mukhopadhyay ND, Gong B, Hinrichs A, Li X, Liu X, Malhotra A, Mehta T, Page G, Rao S, Saccone N, Shete S, Yang Y, Yu R, Zhao JH, Zhou X. Data mining of RNA expression and DNA genotype data: presentation group 5 contributions to Genetic Analysis Workshop 15. Genet Epidemiol. 2007;31 Suppl 1:S43-50. [PMID: 18046764]
     
  3. Yi N, Shriner D, Banerjee S, Mehta T, Pomp D, Yandell BS. An efficient Bayesian model selection approach for interacting quantitative trait loci models with many effects. Genetics. 2007 Jul;176(3):1865-77. Epub 2007 May 4. [PMID: 17483424]
     
  4. Yandell BS, Mehta T, Banerjee S, Shriner D, Venkataraman R, Moon JY, Neely WW, Wu H, von Smith R, Yi N. R/qtlbim: QTL with Bayesian Interval Mapping in experimental crosses. Bioinformatics. 2007 Mar 1;23(5):641-3. Epub 2007 Jan 19. [PMID: 17237038]
     
  1. Mehta TS, Zakharkin SO, Gadbury GL, Allison DB. Epistemological issues in omics and high-dimensional biology: give the people what they want. Physiol Genomics. 2006 Dec 13;28(1):24-32. Epub 2006 Sep 12. [PMID: 16968808]
     
  2. 9: Wei H, Persson S, Mehta T, Srinivasasainagendra V, Chen L, Page GP, Somerville C, Loraine A. Transcriptional coordination of the metabolic network in Arabidopsis. Plant Physiol. 2006 Oct;142(2):762-74. Epub 2006 Aug 18. [PMID: 16920875]
  1. Zakharkin SO, Kim K, Mehta T, Chen L, Barnes S, Scheirer KE, Parrish RS, Allison DB, Page GP. Sources of variation in Affymetrix microarray experiments. BMC Bioinformatics. 2005 Aug 29;6:214. [PMID: 16124883]
     
  2. Trivedi P, Edwards JW, Wang J, Gadbury GL, Srinivasasainagendra V, Zakharkin SO, Kim K, Mehta T, Brand JP, Patki A, Page GP, Allison DB. HDBStat!: a platform-independent software suite for statistical analysis of high dimensional biology data. BMC Bioinformatics. 2005 Apr 6;6:86. [PMID: 15813968]
  1. Mehta T, Tanik M, Allison DB. Towards sound epistemological foundations of statistical methods for high-dimensional biology. Nat Genet. 2004 Sep;36(9):943-7. [PMID: 15340433]