ANALYSIS OF EXPERIMENTAL CROSSES

Yi N, Banerjee S, Pomp D, Yandell BS. (2007) Bayesian mapping of genomewide interacting quantitative trait loci for ordinal traits. Genetics, 176(3):1855-64.

Hsu HC, Lu L, Yi N, Van Zant G, Williams RW, Mountz JD. (2007) Quantitative trait locus (QTL) mapping in aging systems. Methods Mol Biol, 371:321-48.

Yi N, Shriner D, Banerjee S, Mehta T, Pomp D, Yandell BS (2007). An efficient Bayesian model selection approach for interacting quantitative trait loci models with many effects. Genetics, 176(3):1865-77.

Yandell BS, Mehta T, Banerjee S, Shriner D, Venkataraman R, Moon JY, Neely WW, Wu H, von Smith R, Yi N (2007). R/qtlbim: QTL with Bayesian Interval Mapping in experimental crosses. Bioinformatics, 23(5):641-3.

Musani SK, Zhang HG, Hsu HC, Yi N, Gorman BS, Allison DB, Mountz JD. (2006) Principal component analysis of quantitative trait loci for immune response to adenovirus in mice. Hereditas, 143(2006):189-97.

Yang R, Yi N, Xu S (2006). Box-Cox transformation for QTL mapping. Genetica, 128(1-3):133-43.

Yi, N., Zinniel, D. K., Kim, K., Eisen, E. J., Bartolucci, A., Allison, D. B., and Pomp, D. (2006). Bayesian analyses of multiple epistatic QTL models for body weight and body composition in mice.Genetical Research, 87(1): 45-60.

De Luca, M., Yi, N., Allison, D. B., Leips, J., and Ruden, D. M. (2005). Mapping quantitative trait loci affecting variation in Drosophila triacylglycerol storage. Obesity Research, 13(9): 1596-1605

Yi, N., Yandell, B. S., Churchill, G. A., Allison, D. B., Eisen, E. J., and Pomp, D. (2005). Bayesian model selection for genome-wide epistatic QTL analysis. Genetics, 170(3): 1333-1344

Hansen, C., Yi, N., Zhang, Y.-M., Xu, S., Gavora, J., and Cheng, H. H. (2005). Identification of QTL for production traits in chicken. Animal Biotechnology, 16(1): 67-79

Mountz, J. D., Yang, P., Wu, Q., Zhou, J., Tousson, A., Fitzgerald, A., Allen, J., Wang, X., Cartner, S., Grizzle, W. E., Yi, N., Lu, L., Williams, R. W., and Hsu, H.-C. (2005). Genetic segregation of spontaneous erosive arthritis and generalized autoimmune disease in BXD2 recombinant inbred strain of mice. Scandinavian Journal of Immunology, 61: 128-138

Zhang, H.-G., High, K. A., Wu, Q., Yang, P., Schlachterman, A., Yu, S., Yi, N., Hsu, H.-C., and Mountz, J. D. (2005). Genetic analysis of the antibody response to AAV2 and factor IX. Molecular Therapy, 11(6): 866-874

Ruth, J. H., Amin, M. A., Woods, J. M., He, X., Samuel, S., Yi, N., Haas, C. S., Koch, E. A., and Bullard, D. C. (2005). Accelerated development of arthritis in mice lacking endothelial selectins. Arthritis Research & Therapy, 7(5): R959-R970

Beasley TM, Yang D, Yi N, Bullard DC, Amos CI, Xu S, Allison DB. (2004). Joint Tests for Quantitative Trait Loci in Experimental Crosses. Genetics Selection Evolution, 36, 601-619.

Farahani P, Fisler J, Wong H, Diament A, Yi N, Warden C. (2004). Reciprocal hemizygosity analysis of mouse hepatic lipase (Lipc) reveals influence on obesity. Obesity Research, 12, 292-306.

Warden C, Yi N, Fisler J. (2004). Epistasis among genes is a universal phenomenon in obesity: evidence from rodent models. Nutrition, 20, 74-77.

Yi N, Diament A, Chiu S, Fisler J, Warden C. (2004). Epistatic interaction between two nonstructural loci on chromosomes 7 and 3 influences hepatic lipase activity in BSB mice. Journal of Lipid Research, 45, 2063-2070.

Yi N, Diament A, Chiu S, Fisler J, Warden C. (2004). Characterization of Epistasis influencing complex spontaneous obesity in the BSB model. Genetics, 167, 399-409.

Yi N. (2004). A unified Markov chain Monte Carlo framework for mapping multiple quantitative trait loci. Genetics, 167, 967-975.

Yi N, Xu S, George V, Allison DB. (2004). Mapping multiple quantitative trait loci for complex ordinal traits. Behavior Genetics, 34, 3-15.

Yi N, Chiu S, Allison DB, Fisler JS, Warden CH (2004). Epistatic interaction between two nonstructural loci on chromosomes 7 and 3 influences hepatic lipase activity in BSB mice. J Lipid Res, 45(11):2063-70.

Zhang H, Hsu H, Yi N, Yang P, Wu Q, Allison DB, Mountz JD. (2004). Identification of Multiple Genetic Loci that Regulate Adenovirus Gene Therapy. Gene Therapy, 11, 4-14.

Xu, S., Yi, N., Burke, D., Galeki, A., Miller, R. A. (2003) An EM algorithm for mapping binary disease loci: application to fibrosarcoma in a four-way cross mouse family. Genetical Research, 82: 127-138.

Yi, N., George, V., Allison, D. B. (2003). Stochastic Search Variable Selection for Identifying Multiple Quantitative Trait Loci. Genetics, 164: 1129-1138.

Yi, N., Xu, S., Allison, D. B. (2003). Bayesian Model Choice and Search Strategies for Mapping Interacting Quantitative Trait Loci. Genetics, 165: 867-83.

Hsu, H., Zhang, H., Li, L., Yi, N., Yang, P., Wu, Q., Wu, Y., Sun, S., Renda, J., Xu, X., Yang, X., Lu, L., Van Zant, G., Williams, R. W., Allison, D. B., Mountz, J. D. (2003). Age-related Thymic Involution in C57BL/6J X DBA/2J Recombinant Inbred Mice Fits A Negative Exponential Regression Model and Maps to Mouse Chromosome 9. Genes and Immunity, 4: 402-10.

Yi, N., Xu, S. (2002). Linkage Analysis of Quantitative Trait Loci in Multiple Line Crosses. Genetica, 114, 217-230.

Yi, N., Xu, S. (2002). Mapping quantitative trait loci with epistatic effects. Genetical Research, 79, 185-198.

Ko, C. , Lee, T-L, Lau, P. W., Li, J., Davis, B. T., Voyiaziakis, E., Allison, D. B., Chua, S. C., & Huang, L-S. (2001).Two novel quantitative trait loci on mouse chromosomes 6 and 4 independently and synergistically regulate plasma apoB levels.  Journal of Lipid Research, 42, 844-855.

Yi, N. & Xu, S. (2001). Bayesian mapping of quantitative trait loci under complicated mating designs.  Genetics, 157, 1759-1771.

Yi, N., Xu, S. (2000). Bayesian mapping of quantitative trait loci for complex binary traits.  Genetics, 155, 1391-1403.

Yi, N., Xu, S. (1999). Mapping quantitative trait loci for complex binary traits in outbred populations.  Heredity, 82, 668-676.

Yi, N., Xu, S. (1999). A random approach to mapping quantitative trait loci for complex binary traits in outbred populations.  Genetics, 153, 1029-1040.